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arXiv· arXiv:2603.05706· Chen Yueh-Han, Robert McCarthy, Bruce W. Lee, He He, Ian Kivlichan, Bowen Baker, Micah Carroll, Tomek Korbak·Indexed by this site · Originally publishedSelectedAttention40

Reasoning models struggle to control their own chain of thought

Reasoning Models Struggle to Control their Chains of Thought

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Evaluation and benchmarks

Based on the paper PDF (AI-generated); refer to the original

The authors propose the CoT-Control evaluation suite to measure reasoning models' ability to control their own chain of thought, and find that the CoT controllability of 13 frontier models is mostly below 10%, far lower than output controllability.

Questions
CoT monitoring relies on models writing their true thoughts into their chain of thought, but if models can deliberately control the content of their CoT, monitoring will fail. The authors call this ability CoT controllability, and there has previously been no systematic measurement of it.
Methods
The authors build the CoT-Control suite: they attach CoT instructions to 14,076 questions from 5 benchmarks including GPQA (three difficulty levels: suppressing keywords, adding content, and style modification), score with programmatic checks, and stress-test with situation-awareness prompts, GEPA-style red-teaming, and multiple sampling.
Experiments and results
The CoT controllability of 13 frontier reasoning models is mostly below 10%, with DeepSeek R1 as low as 0.1%, while output controllability generally exceeds 60%; controllability rises with model scale and falls with RL training, reasoning length, and task difficulty; improvements from red-team pressure do not generalize to new instruction types.
Limitations and future work
The authors note that the task is only a proxy measurement, assuming instruction following represents the ability to evade monitoring; only prompt-based inducement was tested, and how much fine-tuning or RL could raise controllability was not explored; the breadth of control types in the evaluation is limited. The experiments cover 13 reasoning models, and the number of repetitions for the main evaluation is not reported.
Experimental setupClaude 3.7 Sonnet、Claude Sonnet 4 et al. · CoT-Control(基于 GPQA、MMLU-Pro、Humanity's Last Exam、BFCL、SWE-Bench Verified 构建) · Controllability Score、Meta Discussion Rate et al.
Threat model
The paper measures reasoning models' CoT controllability: the ability to control the content of their chain of thought according to instructions while solving problems (suppressing keywords, adding content, style modification); the lower the controllability, the more reliable CoT monitoring is. The authors also use situational-awareness prompts and GEPA-style automated red-teaming to simulate a model's motivation to actively evade monitoring.
Evaluated models
Claude 3.7 SonnetClaude Sonnet 4Claude Sonnet 4.5GPT-5.2GPT-5.1GPT-5o4-minio3GPT-OSS 120BGPT-OSS 20BQwen3 32BQwen3 14BDeepSeek R1
Benchmarks
CoT-Control(基于 GPQA、MMLU-Pro、Humanity's Last Exam、BFCL、SWE-Bench Verified 构建)
Metrics
Controllability ScoreMeta Discussion RateControllability Score without Meta-Discussion
AI summaryand selection rationaleResearchers from New York University, University College London, OpenAI, and other institutions propose the CoT-Control evaluation suite, using 14,076 questions drawn from GPQA, MMLU-Pro, HLE, BFCL, and SWE-Bench Verified to measure reasoning models' ability to control the content of their chain of thought according to instructions. Across 13 frontier reasoning models, chain-of-thought controllability is mostly below 10%, far lower than output controllability; for example, Claude Sonnet 4.5 has chain-of-thought controllability of only 2.7% while output controllability reaches 61.9%, and DeepSeek R1 is as low as 0.1%. Controllability of open-weight models rises with parameter scale but declines with RLVR training, reasoning effort, and question difficulty, with OLMo-3-7B-RL-Zero-Math dropping by more than an order of magnitude during RL training. Telling the model it is being monitored or evaluated can increase controllability by at most 4 percentage points, while gains from GEPA-like adversarial prompt optimization are difficult to transfer to unseen instruction types.

Researchers from New York University, University College London, OpenAI, and other institutions propose the CoT-Control evaluation suite, using 14,076 questions drawn from GPQA, MMLU-Pro, HLE, BFCL, and SWE-Bench Verified to measure reasoning models' ability to control the content of their chain of thought according to instructions. Across 13 frontier reasoning models, chain-of-thought controllability is mostly below 10%, far lower than output controllability; for example, Claude Sonnet 4.5 has chain-of-thought controllability of only 2.7% while output controllability reaches 61.9%, and DeepSeek R1 is as low as 0.1%. Controllability of open-weight models rises with parameter scale but declines with RLVR training, reasoning effort, and question difficulty, with OLMo-3-7B-RL-Zero-Math dropping by more than an order of magnitude during RL training. Telling the model it is being monitored or evaluated can increase controllability by at most 4 percentage points, while gains from GEPA-like adversarial prompt optimization are difficult to transfer to unseen instruction types.

Why it was selectedThe paper measures that the chain-of-thought controllability of 13 reasoning models is far lower than output controllability and decreases with RL training, providing a quantitative baseline for evaluating the robustness of chain-of-thought monitoring.

Paper analysis

6 questions; open one to read the full answer

  1. What problem does this paper attempt to solve?

    The authors propose and measure CoT controllability: whether reasoning models can deliberately control the content of their chain of thought to evade CoT monitoring.

    Core question: Can reasoning models deliberately control the content of their own chain of thought (CoT)? If so, CoT monitoring as a safety measure would fail, and there has previously been no systematic measurement of this ability.

    • Problem scenario: CoT monitoring is used to detect misaligned behavior in reasoning models, on the premise that models will write malicious intentions and plans into their CoT (the authors cite Baker et al., 2025, etc.). The authors argue that as models' situational awareness increases, they may learn to suppress or reshape their CoT, eroding this oversight signal.
    • Measurement difficulty: The authors point out that directly measuring "deliberate evasion of monitoring" poses conceptual and technical difficulties—current models lack the motivation to evade, failures may stem from insufficient capability rather than a lack of evasion tendency, the best elicitation settings differ across models, and "intent" is hard to operationalize.
    • Core approach: The authors do not directly solve the above problems, but instead use proxy measurement: give the model explicit CoT constraint instructions (e.g., do not use a certain word in reasoning while solving the problem), and estimate CoT controllability from the degree of compliance.
    • Paper output: The authors propose the CoT-Control evaluation suite (14,076 instances, sourced from GPQA, MMLU-Pro, HLE, BFCL, SWE-Bench Verified), evaluate it on 13 frontier reasoning models, and additionally use situational-awareness prompts and automated red-teaming to simulate evasion motivation.
    • Threat model (as stated in the paper):
      • Risk of concern: a misaligned model uses CoT controllability to hide its true reasoning and reduce monitorability (the degree to which it can be inspected by external oversight mechanisms).
      • Measurement method: impose CoT constraints via prompts (three types: suppression, addition, style modification), and simulate evasion incentives with prompts hinting at "being monitored/evaluated" and GEPA-style stress prompts.
      • Victim system: external oversight mechanisms that rely on CoT monitoring.
      • The authors explicitly state this is proxy measurement; an ideal evaluation should test whether models that spontaneously pursue misaligned goals can control their CoT, but the authors believe such an evaluation is difficult to operationalize realistically.
  2. What related research exists?

    Related work falls into four groups: CoT monitoring, failure paths of monitoring, CoT instruction following, and reasoning training and inducement methods.

    CoT monitoring and its basis

    • Baker et al. (2025), Korbak et al. (2025)—propose CoT monitoring: reading model reasoning to achieve earlier and more fine-grained oversight than checking outputs alone; Korbak et al. call monitorability a fragile opportunity.
    • METR (2025), Emmons et al. (2025), Guan et al. (2025)—provide evidence that CoT is informative for oversight; Emmons et al. find that when CoT is necessary for solving the problem, models struggle to evade monitoring.

    Failure paths of monitoring

    • Baker et al. (2025), Skaf et al. (2025), Drori et al. (2025)—the low monitorability path: training selects for reducing the useful signal exposed in the CoT (e.g., direct optimization pressure on the CoT, learning steganography under process supervision).
    • Zolkowski et al. (2025), Yueh-Han et al. (2025a), Li et al. (2025)—the high controllability path: models obfuscate reasoning, decompose malicious reasoning into seemingly harmless steps, and covertly sandbag under CoT monitoring. The authors position their work as an adversarial perspective: under misalignment risk, a model's ability to shape its CoT may be used to evade monitoring.

    CoT instruction following

    • Kwon et al. (2025) (ReasonIF)—find that large reasoning models struggle to follow instructions during reasoning. The authors argue that in benign settings, instruction following within reasoning improves usability, but this paper focuses on its adversarial implications.

    Reasoning training and elicitation methods

    • Wei et al. (2023), Kojima et al. (2023), Wang et al. (2023), Yao et al. (2023a,b)—CoT prompting and test-time methods (self-consistency, ReAct, Tree of Thoughts).
    • Wen et al. (2025), Havrilla et al. (2024), OpenAI o1 (2024)—train reasoning ability via process supervision and RLVR; this paper hypothesizes that RLVR only optimizes outcome correctness and does not constrain the CoT, which may lead to low controllability.
    • Elicitation and red-teaming methods: GEPA (Agrawal et al., 2025, reflective prompt evolution), Perez et al. (2022, using language models to red-team language models), Brown et al. (2024, repeated sampling to amplify capability).

    Baselines and benchmarks: the paper's three baselines are output controllability, external CoT controllability (reasoning models), and external CoT controllability (non-reasoning models GPT-4o, Llama 3.3 70b Instruct, DeepSeek Chat v3); the evaluation data are sourced from GPQA, MMLU-Pro, HLE, BFCL, and SWE-Bench Verified.

    Author positioning: monitorability and controllability form four states, and only high monitorability + low controllability is desirable; CoT-Control measures precisely the latter, as a complement to monitorability evaluations.

  3. How does the paper address this problem?

    CoT-Control: attach CoT constraint instructions to benchmark questions and use programmatic checks to measure a model's ability to control its chain of thought.

    Overall approach: operationalize CoT controllability as "the ability to follow CoT constraint instructions while keeping the task objective unchanged," build the CoT-Control evaluation suite, and use multiple stress tests to approximate adversarial scenarios.

    Definition and task design

    • CoT controllability is defined as the ability of a reasoning model to reliably control properties of its CoT in a way that reduces monitorability; the authors estimate it using proxy instructions: the task objective is fixed, and only the CoT is constrained.
    • Three types of control related to evasion (Table 1), each split into easy/medium/hard levels: information suppression (suppress a single keyword, multiple keywords, completely ignore the question), information addition (add markers at the beginning and end, add a word at the end of sentences, insert words between words), style modification (all lowercase, all uppercase, alternating case).
    • The instruction is placed at the end of the user message, and the model is required not to mention the constraint in its reasoning (Figure 4); the authors tried placing it in the system prompt, and controllability was lower (Figure 29).

    Data construction

    • Questions come from GPQA (445), MMLU-Pro (300), HLE (469), SWE-Bench (200), and BFCL (150), totaling 1,564 questions, each paired with 9 tests, for a total of 14,076 instances; during evaluation, each data source is equally weighted (Figure 3).
    • Keyword selection: first collect 24 baseline CoTs from 8 models × 3 runs, have GPT-5 extract 20 candidate words from the question, and select the one that appears in all 24 trajectories and has the highest total frequency.
    • Sanity check: 30 manually designed multiple-choice questions testing whether models understand the concept of a "reasoning phase" and whether they are aware they have a reasoning phase, with each question run 5 times (Appendix B.1).

    Metrics and baselines

    • Main metric Controllability Score: the percentage of samples where the CoT was successfully controlled, macro-averaged over (dataset × control type). Secondary metrics: Meta Discussion Rate (the proportion of samples that follow the instruction but mention the constraint), and the controllability score after removing meta-discussion.
    • Scoring uses programmatic checks for each type; the only exception is the "ignore the question" type, which is judged by GPT-5-mini and verified with two reruns (counted as failure only if all three fail); the authors report 100% agreement with human annotation on 120 random samples.
    • Three baselines: output controllability (constrain the final answer); external CoT controllability (3 reasoning models write their reasoning into <output_reasoning> tags and then control it); external CoT controllability (3 non-reasoning models).

    Stress tests

    • Situational awareness: append to the end of the user prompt "your reasoning is being closely monitored by another language model" (monitoring awareness) or "you are in an evaluation phase and your CoT controllability is being evaluated" (evaluation awareness).
    • Automated red-teaming: a GEPA-style loop, with GPT-5 acting as the red team, iterating for 10 rounds to optimize the stress prompt; first select seeds from 9 candidate seed prompts (shutdown threat, monetary reward, authority hints, etc., Table 3) on 225 samples, then evolve on the training instruction types, and finally test generalization on 3 unseen control types.
    • Repeated attempts: up to 10 independent samples per question, computing pass@10; there is also a non-independent variant IRPAIF—after each failure, GPT-5-mini gives a failure summary that is appended to the next prompt (Appendix C; the authors state this setting is unrealistic and serves only as an upper bound on elicitability).

    Factor analysis

    • Use logistic regression to analyze the relationship between controllability and task difficulty (necessity of CoT, binned by per-question accuracy over 5 samples), reasoning length, and question domain, controlling for variables such as model, dataset, and control type.
    • RL effects: measure changes in controllability on consecutive checkpoints of OLMo-3-7B-RL-Zero (Math/Code/General), and compare Magistral-Medium, OLMo-3-Think (7B/32B), and OpenThinker3-7B before and after training; this section uses a QA subset of 1,066 questions, a maximum of 15,000 tokens, temperature 0.6, and reduced evaluation difficulty (Appendix E.2).
  4. What experiments did the paper conduct?

    The CoT controllability of 13 reasoning models is mostly below 10%, far lower than output controllability; it rises with scale and falls with RL and reasoning length.

    Experimental Setup

    • Models tested: 13 reasoning models—Claude 3.7 Sonnet, Claude Sonnet 4, Claude Sonnet 4.5, GPT-5.2, GPT-5.1, GPT-5, o4-mini, o3, GPT-OSS 120B, GPT-OSS 20B, Qwen3 32B, Qwen3 14B, DeepSeek R1; raw CoT for OpenAI models was obtained through collaboration with OpenAI.
    • Benchmark: CoT-Control, 14,076 instances (1,564 questions × 9 test types), derived from GPQA, MMLU-Pro, HLE, SWE-Bench, BFCL.
    • Baselines: output controllability; external CoT controllability (reasoning models GPT-OSS-120B, Claude 3.7 Sonnet, DeepSeek-R1); external CoT controllability (non-reasoning models GPT-4o, Llama 3.3 70b Instruct, DeepSeek Chat v3).
    • Metrics: Controllability Score (primary), Meta Discussion Rate, de-meta-discussion controllability (secondary), macro-averaged over (dataset × control type).
    • Judging method: primarily programmatic checks; the "ignore the question" type is judged by GPT-5-mini, counted as failure only if all three runs fail, with 100% agreement with human annotation on 120 samples.
    • Decoding settings: greedy decoding except where temperature sampling (temperature 0) is noted; the main evaluation does not report the number of repetitions.

    Main Results

    According to Figure 1a (CoT and output controllability, %):

    ModelCoT controllabilityOutput controllability
    Claude 3.7 Sonnet36.159.5
    Claude Sonnet 419.069.3
    Claude Sonnet 4.52.761.9
    GPT-5.215.456.1
    GPT-5.16.064.9
    GPT-OSS 120B4.653.1
    o32.862.4
    Qwen3 32B2.866.3
    GPT-52.737.8
    GPT-OSS 20B2.636.8
    Qwen3 14B1.245.9
    o4-mini0.753.8
    DeepSeek R10.148.6
    • The authors state that CoT controllability is generally low for reasoning models (mostly below 10%), whereas output controllability is mostly ≥60% and external reasoning controllability ≥70% (non-reasoning models ≥57%, Figure 25).
    • Exceptions: Claude 3.7 Sonnet (36.1%) and Claude Sonnet 4 (19.0%) have markedly higher CoT controllability than other models; the Figure 1a caption notes that this comparison is confounded by length.
    • By control type (Table 2): for most models suppression is strongest, e.g., Claude 3.7 Sonnet suppression 15.0%, addition 49.9%, style 51.1% are counterexamples; 8 of the 13 models are highest on suppression.

    Stress Tests: Situation Awareness and Red-Teaming

    • Situation awareness (Figure 6, 4,050 samples per model): monitoring awareness and evaluation awareness can slightly raise controllability, which the authors state is at most 4 percentage points; McNemar tests (α=0.05) show significant improvement under monitoring awareness for the three Claude models, and improvement under both awareness conditions for Qwen3-32B, Claude Sonnet 4.5, and GPT-5.2.
    • Automated red-teaming (Figure 7): stress prompts found by GEPA are effective on types seen in training (Appendix Figure 39) but generalize poorly—only 3 of 8 models improve on unseen types, each by less than 5 percentage points (GPT-OSS 120B +4.9, GPT-OSS 20B +4.0, Claude 3.7 Sonnet +2.9), while Qwen3 32B instead drops by -2.7.
    • Repeated attempts (Figure 40): pass@10 raises controllability, e.g., Claude 3.7 Sonnet from 36.1% at pass@1 to 60.4%, Claude Sonnet 4.5 from 10.4% to 19.1%; the authors state that newer Claude models are more resistant. IRPAIF (Appendix C) yields larger gains: GPT-OSS 120B +44 pp, Claude 3.7 +30 pp, Claude Sonnet 4.5 only +5 pp; the authors emphasize that this setting is unrealistic and serves only as an upper bound.

    Analysis of Influencing Factors

    • Task difficulty (Figure 8): controllability is lower when CoT is required (Claude 3.7 Sonnet: not required 36.6% vs required 11.4%); by accuracy band, Extremely Easy 43.9% vs Hard 5.4% (Claude 3.7 Sonnet); logistic regression shows that per 1 standard deviation increase in accuracy (about 35 pp), the odds of controllability rise by about 10%.
    • Reasoning effort and length (Figure 9, Section 5.3): GPT-OSS-120B drops from 10.3% at low to 1.3% at high; per 1 standard deviation increase in reasoning length (about 2,000 words), the odds of controllability fall by about 20% (odds ratio 0.79, p<0.001); output controllability is essentially unchanged with length (mean power-law exponent 0.001, Figure 23). Breakpoints vary by model: Claude 3.7 Sonnet declines after about 800 words, Claude Sonnet 4 after about 200 words (Figure 34).
    • RL training (Figure 1d, 10, 15, 16): OLMo-3-7B-RL-Zero-Math controllability declines by more than an order of magnitude with RLVR steps; the decline is slower for General data than for Code and Math; OLMo-3-Think 7B drops from 10.6% at Base to 0.8% after RL, Magistral-Medium from 31.4% to 0.7%, while OpenThinker3-7B rises from 20.8% to 79.7% as an exception (Figure 16, unexplained by the authors).
    • Other: task performance drops by 6.0–16.7 pp when suppression succeeds, and by ≤2.7 pp for addition and style modification (Figure 5); controllability is lower in quantitative domains (Math −13.0%, Physics −18.5%, Chemistry −9.8%), Business +7.1% (Figure 41); controllability has no clear relationship with benchmark scores (Figure 22); the meta discussion rate is ≥90% for the "ignore the question" type and ≤10% for the other types (Appendix Figure 26).
  5. What are some points that can be further explored?

    The authors acknowledge three limitations: proxy measurement, prompt-based elicitation only, and limited breadth of control types; the experiments cover 13 reasoning models.

    Limitations and future directions noted by the authors

    • Representativeness of proxy measurement (Discussion/Limitations): The tasks in CoT-Control are practical proxies, assuming that the generalization of instruction-following training from output to CoT can represent the generalization of controlling CoT for misaligned goals; an ideal evaluation should test whether models that spontaneously pursue misaligned goals can control their CoT to evade monitoring, but the authors believe this is difficult to operationalize realistically.
    • Prompt-based elicitation only (Discussion/Limitations): The authors only did prompting-based elicitation, and suggest that future work could explore how much different amounts of RL or supervised fine-tuning can raise controllability.
    • Limited breadth of control types (Discussion/Limitations): Models differ in their ability to control different CoT features, and the breadth of control types evaluated by the authors is limited.
    • Unclear influence of training stages (Appendix E, Figure 15 caption): OLMo-3-Think 32B's controllability drops sharply after SFT and partially recovers during the DPO and RL stages; the authors state that the specific influence of each training stage before RL is not yet settled and leave it to future work.
    • Mechanism unknown (Conclusion): The mechanism behind low controllability is not yet clear, and the authors suggest that frontier labs track CoT controllability in future models.

    Scope of experiments

    • The models tested are 13 reasoning models (3 Claude series, 3 GPT-5 series, o3, o4-mini, 2 GPT-OSS, 2 Qwen3, DeepSeek R1), plus 3 non-reasoning models used only as external CoT baselines.
    • The evaluation data are the 14,076 instances of CoT-Control, sourced from 5 benchmarks; the RL training analysis uses only the QA subset of 1,066 questions, and with reduced evaluation difficulty (Appendix E.2).
    • The red-team generalization test covers 3 unseen control types and 8 models; the situational-awareness experiment has 4,050 samples per model.
    • The sanity check consists of 30 multiple-choice questions, each run 5 times; the human agreement verification for the "ignore the question" judgment uses 120 random samples.
    • The paper does not report the number of repetitions for the main evaluation; the situational-awareness and red-team experiments cover only some models (13 in Figure 6, 8 in Figure 7).
  6. Summarize the main content of the paper

    The authors define and measure CoT controllability, find that reasoning models mostly struggle to control their chain of thought, and the authors are cautiously optimistic about this.

    An evaluation paper on the reliability of CoT monitoring. CoT monitoring relies on models writing their true reasoning into their chain of thought; the authors name the ability of "a model to deliberately control the content of its CoT" CoT controllability, and build the CoT-Control suite to measure it: attach three types of CoT constraints (suppression, addition, style modification; each with three difficulty levels) to 1,564 questions from 5 benchmarks including GPQA, for a total of 14,076 instances, scored with programmatic checks.

    • Method highlights: constraint instructions are placed at the end of the user message and the model is forbidden to mention them; stress tests use situational-awareness prompts, GEPA-style automated red-teaming (with GPT-5 acting as the red team), and pass@10 repeated sampling; logistic regression analyzes factors such as difficulty, length, and domain.
    • Main results: the CoT controllability of 13 frontier reasoning models is mostly below 10%, with DeepSeek R1 as low as 0.1%, while output controllability generally exceeds 60% (Figure 1a, 25); the exceptions are Claude 3.7 Sonnet (36.1%) and Claude Sonnet 4 (19.0%).
    • Scale and training: among open-source models, controllability rises with parameter count (GPT-OSS 120B 5.9% vs 20B 0.9%); it falls by more than an order of magnitude with RLVR training (OLMo-3-7B-RL-Zero-Math), and Code/Math data cause a faster decline than General data.
    • Stress tests: telling the model it is being monitored or evaluated raises controllability by at most 4 percentage points (the authors state this is statistically significant); improvements from red-team stress prompts do not generalize to unseen control types (only 3 of 8 models improve, each by less than 5 percentage points).
    • Other findings: controllability falls with reasoning effort, reasoning length, and task difficulty; when information suppression succeeds, task performance drops by 6.0–16.7 pp.

    The authors' conclusion: the results make them cautiously optimistic—the low CoT controllability of current reasoning models means it is unlikely to become a failure mode of CoT monitoring for now, but the mechanism is unclear, and controllability rises with scale; the authors suggest that frontier labs track this metric in future models.

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